Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTACGAGGCAGCTGTAT
.(((((((((..(((((.(((&))).))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021248
GeneSymbolCDH22
Binding site2145,2165
Score1.0
Seed1
Au0.382
Energy-23.0
Binding len20
Me-9.965
Phylopstem3.8668124444444447
Phylopflank3.0519565799999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure