Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGCCGCATGTTGTC
..(((((((((((((..(((.&))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021249
GeneSymbolSNX6
Binding site2768,2786
Score0.923
Seed1
Au0.5
Energy-21.0
Binding len18
Me-5.19
Phylopstem5.207353428571429
Phylopflank6.09804771
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure