Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTACAGCTGCGGCTTTGGAGAACTTACAGGTGGAGGCGAG
(((((((((((((((((((((&)))).))))))))))))).....................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021253
GeneSymbolTRIM39
Binding site726,770
Score1.0
Seed1
Au0.441
Energy-25.2
Binding len44
Me-3.938
Phylopstem1.6777292209302324
Phylopflank1.9735748699999998
Longest consecutive pairings13
Position of longest consecutive pairings26
Pairings in 3prime end8
PositionCDS
2D Structure