Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAGGCCTAAAGGTCAGCTTCAGAAAGAGCCACCAGCTGGAAGCTGCAT
.(((((((.((((((...(((&.)))..))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021258
GeneSymbolIL22RA1
Binding site1328,1380
Score0.846
Seed1
Au0.456
Energy-21.2
Binding len22
Me-5.083
Phylopstem0.05115649999999998
Phylopflank0.074562235
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure