Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGGCAACTGCCTGACGTTGCAC
.((((((.((((((((..(((&)))...)))))))).....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021258
GeneSymbolIL22RA1
Binding site2373,2399
Score0.846
Seed1
Au0.485
Energy-19.5
Binding len26
Me-6.107
Phylopstem2.61337373125
Phylopflank1.03498640875
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure