Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTCCGCAGACACAGCTACCTGTATGCCAGC
..((((((((((..((((....&.)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021259
GeneSymbolPGAP6
Binding site1684,1717
Score0.846
Seed1
Au0.353
Energy-20.2
Binding len17
Me-7.103
Phylopstem5.6497399999999995
Phylopflank3.9757875250000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure