Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTGCAGCTGCAAG
(((((((((((((((......&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021259
GeneSymbolPGAP6
Binding site1713,1729
Score1.0
Seed1
Au0.353
Energy-27.1
Binding len16
Me-4.171
Phylopstem3.8457730000000003
Phylopflank5.0240393375
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure