Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGTGCAGGAACTGTGCGCTGGTGCGCTGCAGCTGCT
..((((((((((.((((.(((&.)))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021615
GeneSymbolCHST6
Binding site1620,1660
Score0.846
Seed1
Au0.324
Energy-24.6
Binding len21
Me-6.246
Phylopstem-0.5210982000000001
Phylopflank-0.07625847499999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure