Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTACATTGTTCCCT
....((...(((((((((((((&)))))))))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021623
GeneSymbolPLEKHA2
Binding site2888,2906
Score0.846
Seed0
Au0.544
Energy-16.2
Binding len18
Me-14.46
Phylopstem-0.10937376923076919
Phylopflank-0.3872361750000001
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end8
Position3UTR
2D Structure