Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTCCTACCTGTGTGCCATGGTC
((((((((((((..((((....&.)))).))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021625
GeneSymbolTRPV4
Binding site1504,1529
Score1.0
Seed1
Au0.471
Energy-21.0
Binding len20
Me-6.084
Phylopstem4.2488885384615385
Phylopflank4.408110242499999
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure