Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACGACCTGCTGCTGCT
..(((((.(((((((((....&))))))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021625
GeneSymbolTRPV4
Binding site1115,1132
Score0.954
Seed0
Au0.441
Energy-21.7
Binding len17
Me-7.271
Phylopstem5.5505987
Phylopflank4.145268574999999
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure