Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTTGTGCTGCAGCAGCAGA
((((.((((((((...(((((&)))))...)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365987
GeneSymbolDPP9
Binding site2135,2157
Score0.846
Seed0
Au0.471
Energy-21.8
Binding len22
Me-9.882
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure