Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCAGCCGCAGCTTCCAGAGTCTGGCAT
.((((((((((((((...(((&)))..)))))))))))...........))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021630
GeneSymbolPDLIM2
Binding site1236,1267
Score0.923
Seed1
Au0.309
Energy-23.2
Binding len31
Me-4.026
Phylopstem1.3749590404
Phylopflank0.14104791787499998
Longest consecutive pairings11
Position of longest consecutive pairings15
Pairings in 3prime end5
PositionCDS
2D Structure