Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAAGTTTCGTGGAGAATACAATAAGCATGCGCAGCTGTGGA
(((((((((((..(((.....&.)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021634
GeneSymbolRXFP1
Binding site1488,1533
Score0.923
Seed1
Au0.544
Energy-20.9
Binding len18
Me-8.574
Phylopstem5.648136272727272
Phylopflank4.630517858749999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure