Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTATACATCCACAGATCATATAAACTCTCAGCCCTGCTGCAAA
(((((((.(.(((((..((..&.))..)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021635
GeneSymbolPBOV1
Binding site480,524
Score0.846
Seed1
Au0.618
Energy-20.8
Binding len20
Me-7.727
Phylopstem0.48312114285714286
Phylopflank-0.03512140375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure