Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACTTCCACTATTCTCAGCAGCCAACCAGGATTTGGCAGCTGCT
..((((((((((((((.....&.))))))............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021637
GeneSymbolTMEM35A
Binding site1487,1535
Score0.827
Seed1
Au0.456
Energy-22.1
Binding len28
Me-4.957
Phylopstem1.0589974538461537
Phylopflank0.4980600425000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure