Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGCCTCCGCAGCG
.....(((((((..(((((((&))))..)))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021637
GeneSymbolTMEM35A
Binding site12,31
Score0.808
Seed0
Au0.35
Energy-20.9
Binding len19
Me-15.812
Phylopstem2.2405398888888888
Phylopflank2.2921047662499996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure