Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACACTGACCAGGCTGGACAGTGGCGAATACAGTGTGTGCCCAAGGA
.(((((((((((.((((.....&.)))).))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021640
GeneSymbolMYG1
Binding site919,969
Score0.923
Seed1
Au0.368
Energy-18.6
Binding len20
Me-5.082
Phylopstem3.3507883076923077
Phylopflank3.0228037200000006
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure