Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCCAGTAGCTGGGAT
((.((((((((((((..((((&))))))))).....))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021642
GeneSymbolFCGR2A
Binding site1535,1560
Score0.846
Seed0
Au0.485
Energy-20.5
Binding len25
Me-5.728
Phylopstem0.29638382352941184
Phylopflank-0.20102514999999999
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure