Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGGCTGCAGCCTGCAT
.(((((((((((((((.....&)))).))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021648
GeneSymbolTSPYL4
Binding site3060,3078
Score0.846
Seed1
Au0.471
Energy-20.7
Binding len18
Me-3.793
Phylopstem1.6958117647058828
Phylopflank1.89374894375
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure