Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGAAAAGCCGCGGGCTGA
...(((((((((((.......&.)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021649
GeneSymbolTICAM2
Binding site341,361
Score0.923
Seed0
Au0.397
Energy-17.3
Binding len14
Me-7.483
Phylopstem-0.26415717499999997
Phylopflank0.12652157769999997
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end1
Position5UTR
2D Structure