Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTACAATTGCAGCGATGCC
..((((((((((((((((...&)))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021705
GeneSymbolNFYA
Binding site1275,1294
Score0.923
Seed1
Au0.603
Energy-20.9
Binding len19
Me-4.957
Phylopstem1.4421493833333334
Phylopflank1.731919735
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure