Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCAGTGTGGCCAGGC
.((((((.((((.((((.....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021706
GeneSymbolLAIR1
Binding site3876,3892
Score1.0
Seed1
Au0.426
Energy-18.8
Binding len16
Me-7.396
Phylopstem0.06510333333333336
Phylopflank-0.036359092499999995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure