Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGCAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021706
GeneSymbolLAIR1
Binding site3141,3167
Score1.0
Seed0
Au0.426
Energy-22.1
Binding len26
Me-5.728
Phylopstem0.07754318888888889
Phylopflank-0.21066942712499995
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure