Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTGGGGCTGCGGC
((((((((.((((....((((&)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021709
GeneSymbolSIVA1
Binding site280,298
Score0.846
Seed1
Au0.294
Energy-20.8
Binding len18
Me-6.819
Phylopstem0.9650985624999998
Phylopflank1.1345107852500003
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure