Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCACACCACAGCTGCC
..(((((((.(((((((.(((&))).)))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021724
GeneSymbolNR1D1
Binding site1609,1630
Score0.846
Seed1
Au0.338
Energy-24.6
Binding len21
Me-6.2
Phylopstem3.666225875
Phylopflank5.427399187500001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure