Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAGCCTGCAGGAGCT
..((..((((((((((.((((&)))))))))).))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021724
GeneSymbolNR1D1
Binding site1998,2018
Score0.846
Seed0
Au0.397
Energy-22.3
Binding len20
Me-10.977
Phylopstem2.5560355454545456
Phylopflank3.05386486875
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure