Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCATCAATCGCAACCGCTGCC
..(((((((((((((...((.&))....))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021724
GeneSymbolNR1D1
Binding site1028,1051
Score1.0
Seed1
Au0.485
Energy-20.6
Binding len23
Me-5.19
Phylopstem0.2794665375
Phylopflank0.8468488387499999
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure