Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCGTACGGCGGCCGCGGCGGCAGG
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021727
GeneSymbolFADS3
Binding site20,46
Score0.846
Seed0
Au0.147
Energy-25.3
Binding len18
Me-8.057
Phylopstem3.0136374818181824
Phylopflank0.1622056590909091
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure