Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTACAACCAGCAGCACCTGTAC
.((((((((((((((((.(((&))).))))))).)))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021727
GeneSymbolFADS3
Binding site937,962
Score0.923
Seed1
Au0.426
Energy-23.4
Binding len25
Me-3.793
Phylopstem4.6462579999999996
Phylopflank3.3376981750000008
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure