Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGGGCTAGGGAGCGCTTTCTCCCGGGAACCGCGGCTGTGAC
((((((((((((((.(..((.&.)).).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021732
GeneSymbolAVPI1
Binding site30,73
Score1.0
Seed1
Au0.309
Energy-25.8
Binding len21
Me-4.673
Phylopstem0.41010792857142864
Phylopflank0.5929242394230769
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure