Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGGACCTCGGCC
.....((((.((((.((((((&)))))).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021732
GeneSymbolAVPI1
Binding site288,305
Score0.846
Seed0
Au0.382
Energy-20.9
Binding len17
Me-15.644
Phylopstem0.22008166666666665
Phylopflank-0.1558683425
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end7
Position5UTR
2D Structure