Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGGAAGTGGAGCTTGCAGTGA
(((((((((((((((((((...&)))))))))..)))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330761
GeneSymbolZDHHC3
Binding site4784,4809
Score0.846
Seed1
Au0.397
Energy-26.4
Binding len25
Me-3.938
Phylopstem-0.12931110833333334
Phylopflank-0.26601258125
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure