Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCTGCAGTAGCTGCT
..((((((((.((.(((....&))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021797
GeneSymbolCHIA
Binding site385,401
Score0.923
Seed1
Au0.471
Energy-18.4
Binding len16
Me-8.639
Phylopstem3.0263598750000007
Phylopflank2.3617125767499996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure