Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGGAAGGAGACCCCCAGACGCAGCTGCAGG
(((((((((((..((...(((&.)))..))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021805
GeneSymbolSIGIRR
Binding site1167,1202
Score1.0
Seed1
Au0.397
Energy-24.8
Binding len22
Me-8.807
Phylopstem0.3484573272727272
Phylopflank0.5100613605
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure