Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACTTGCACTGCAGCCTGA
...(((((((((.((((((((&)))..)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021818
GeneSymbolSAV1
Binding site2262,2283
Score0.846
Seed0
Au0.471
Energy-18.7
Binding len21
Me-7.804
Phylopstem4.235806
Phylopflank3.1149319675
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end8
Position3UTR
2D Structure