Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGCATTCAATGTAGCTGTCAAT
(((((((((((..((((.(((&))).)))).....)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021821
GeneSymbolMRPS35
Binding site1712,1738
Score0.846
Seed1
Au0.574
Energy-18.9
Binding len26
Me-8.574
Phylopstem0.45594426666666665
Phylopflank0.16455714875000005
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure