Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGCGGCAGCAGG
((((.(((((((((.......&))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021825
GeneSymbolCCDC90B
Binding site3285,3300
Score0.885
Seed0
Au0.456
Energy-18.4
Binding len15
Me-9.025
Phylopstem3.2818794444444443
Phylopflank3.4722433626249996
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end1
Position3UTR
2D Structure