Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTACAGTAGATGCAGTTACCTGGCAACATTGCTACATTGATGGCCGGGTG
(((((((...((((((((....&.))))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021828
GeneSymbolHPSE2
Binding site1024,1076
Score1.0
Seed1
Au0.485
Energy-23.7
Binding len20
Me-8.55
Phylopstem0.11942928750000004
Phylopflank-0.07318586875
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure