Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAGCCTGCTGCTGCTGCT
..(((((.(((((..((((((&))))))....))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021828
GeneSymbolHPSE2
Binding site2198,2220
Score0.923
Seed0
Au0.529
Energy-23.4
Binding len22
Me-8.863
Phylopstem-0.5716265666666668
Phylopflank-0.08425792499999998
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure