Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGAAGGGAGAATTGGTCCCTGGAGTGG
((((..(((((((((((((...&))))))))))))).............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001366011
GeneSymbolCDC42BPA
Binding site6807,6838
Score0.846
Seed0
Au0.485
Energy-23.2
Binding len31
Me-9.958
Phylopstem-0.04492307692307688
Phylopflank-0.3496249999999999
Longest consecutive pairings13
Position of longest consecutive pairings18
Pairings in 3prime end5
Position3UTR
2D Structure