Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGCCGCCCGCGCCGCCGCCGCAGCTGCT
..(((((((((((.((..(((&.))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366011
GeneSymbolCDC42BPA
Binding site268,301
Score1.0
Seed1
Au0.353
Energy-27.5
Binding len19
Me-5.814
Phylopstem1.3714954545454547
Phylopflank1.3413805237500003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure