Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCGGCCCAGATGAGGAAGGAACCCCCTCACCACCTGCCCGGCCCAGGAGCGCAGCTGCAT
.((((((((((.((.(..(((&.))).).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021920
GeneSymbolSCT
Binding site386,451
Score0.846
Seed1
Au0.265
Energy-25.4
Binding len21
Me-7.876
Phylopstem-0.19352507
Phylopflank0.4736794687499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure