Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCACTGTGCGGCTGCAGT
(((((((((((...((..(((&)))..))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021923
GeneSymbolFGFRL1
Binding site152,173
Score0.846
Seed1
Au0.206
Energy-22.2
Binding len21
Me-9.43
Phylopstem0.7910860909090908
Phylopflank1.49362919
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure