Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCCCGCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGGCTGCGGC
(((((((((((((((((((((&)))))))..............................)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021924
GeneSymbolCDHR5
Binding site1044,1096
Score0.846
Seed1
Au0.265
Energy-24.5
Binding len52
Me-3.938
Phylopstem-0.566362288235294
Phylopflank-0.50696116125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure