Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCACACGGTGCTTCTGCACCGCAGCACAGGCAAG
((((.(((((((.((((((((&.)))).)))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021934
GeneSymbolATG101
Binding site542,579
Score0.872
Seed0
Au0.412
Energy-21.5
Binding len26
Me-9.346
Phylopstem3.3051183333333336
Phylopflank4.9091174075
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure