Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGCAGCGAGACGCAGTTGCT
..((((((((((((((.(((.&)))..)))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021945
GeneSymbolSLC22A23
Binding site2152,2176
Score0.936
Seed1
Au0.412
Energy-23.2
Binding len24
Me-4.957
Phylopstem2.1987293444444442
Phylopflank0.8891703200000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure