Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTCTTTCGCTCGCCGCGGCTGCT
..(((((((((((.((((((.&.)))).))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021946
GeneSymbolBCORL1
Binding site1,24
Score1.0
Seed1
Au0.34
Energy-25.0
Binding len22
Me-5.814
Phylopstem1.9561106727272723
Phylopflank2.2051840874999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure