Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAGCTGGTGTTGGAGTGGCTGCT
..((((((((((((((.((((&)))))))))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021947
GeneSymbolSRR
Binding site920,948
Score1.0
Seed1
Au0.544
Energy-21.2
Binding len28
Me-4.957
Phylopstem3.143395456521739
Phylopflank2.7779787812499994
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure