Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGACAGCTCCAGACTGTAAA
(((((((((.((((((..(((&)))....)))))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021947
GeneSymbolSRR
Binding site389,414
Score0.985
Seed1
Au0.515
Energy-19.1
Binding len25
Me-5.18
Phylopstem2.7218112999999997
Phylopflank2.4926160349999997
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure